C-GRAAL statistics

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C-GRAAL specifications

Information


Unique identifier OMICS_04889
Name C-GRAAL
Alternative name Common-neighbors based GRAph ALigner
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Publication for Common-neighbors based GRAph ALigner

C-GRAAL in publications

 (2)
PMCID: 5270500
PMID: 28194172
DOI: 10.1186/s13637-015-0022-9

[…] bipartite matching problem using hungarian algorithm []. more recent mi-graal [] combines alignment strategies of graal and h-graal to further improve alignment quality. in parallel to mi-graal, c-graal [] has appeared, whose node cost function is based on the idea of shared network neighbors rather than graphlet counts. its alignment strategy is a seed-and-extend approach., more recent […]

PMCID: 3996886
PMID: 24800226
DOI: 10.1155/2014/439476

[…] locates the assignment of all pairs of nodes that yield a minimized total cost of alignment. additionally, there are other graphlet-based alignment algorithms including mi-graal [] and the latest c-graal []. like graal, mi-graal is a seed-and-extend approach. however, unlike graal and h-graal, which are purely based on topological information, mi-graal can integrate any type of similarity […]


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C-GRAAL institution(s)
Department of Computer Science, University of California, Irvine, Irvine, CA, USA

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