C-State statistics

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Citations per year

Number of citations per year for the bioinformatics software tool C-State
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Tool usage distribution map

This map represents all the scientific publications referring to C-State per scientific context
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Associated diseases

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C-State specifications

Information


Unique identifier OMICS_19969
Name C-State
Alternative name Chromatin-State
Software type Pipeline/Workflow
Interface Web user interface
Restrictions to use None
Programming languages Javascript
Computer skills Basic
Stability No
Maintained No

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Documentation


Maintainers


This tool is not available anymore.

Additional information


http://www.ccmb.res.in/rakeshmishra/c-state/#Manual

Information


Unique identifier OMICS_19969
Name C-State
Alternative name Chromatin-State
Software type Pipeline/Workflow
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Javascript
License MIT License
Computer skills Medium
Version 0.2.3
Stability No
Maintained No

Download


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Versioning


No version available

Documentation


Maintainers


This tool is not available anymore.

Additional information


http://www.ccmb.res.in/rakeshmishra/c-state/#Manual

Publication for Chromatin-State

C-State citation

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C State: an interactive web app for simultaneous multi gene visualization and comparative epigenetic pattern search

2017
BMC Bioinformatics
PMCID: 5606219
PMID: 28929968
DOI: 10.1186/s12859-017-1786-6

[…] ple IDs of each gene are retained. The data are stored in tab separated flat text files, and a JSON file created to describe the one-to-one mapping of various gene IDs. Whenever a genome is selected, C-State refers to the JSON file to understand various columns of the tab separated file. C-State currently supports 14 genome builds of 8 species (see FAQs in website for full list). […]


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C-State institution(s)
CSIR – Centre for Cellular and Molecular Biology, Hyderabad, India
C-State funding source(s)
Supported by grants from the Indo-Australian Biotechnology Fund-Department of Biotechnology (DBTIABF), Government of India (BT/Indo-Aus/05/36/2010) CSIR grant (BSC0121).

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