Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 6
Release date: May 23 2017
Last update date: Aug 7 2018
Access: Public
Taxon: Caenorhabditis elegans, Saccharomyces cerevisiae
Dataset link RNA self-assembly contributes to stress granule formation and defining the stress granule transcriptome

Experimental Protocol


RNA mixtures were assembled at 150mM NaCl, 10%PEG, 1mM MgCl2 and 150ug/mL total yeast RNA for comparison against total yeast RNA. RNA assemblies were pelleted and sent to the University of Colorado BioFrontiers Institute Next-Gen Sequencing Core Facility for Ribo-Zero treatment, library construction and NextSeq run.

Repositories


GEO

GSE99170

ENA

SRP107782

BioProject

PRJNA387462

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Contact


Roy Parker