Dataset features

Specifications


Dataset type: Expression profiling by high throughput sequencing
Number of samples: 9
Release date: Jan 1 2019
Last update date: Feb 19 2019
Access: Public
Dataset link Global effects of SUPT4H1 RNAi on gene expression of primary human fibroblasts

Experimental Protocol


siRNA-mediated knockdown of SUPT4H1 in fibroblasts cells was performed. Control experiments (treatment with non-targeting siRNA) was compared to knockdown conditions for the assessement of global modulatory effects on cell RNA abundances after SUPT4H1 depletion. Gene expression was assessed using 3' tag sequencing of poly-adenylated RNA (QuantSeq, Lexogen, Vienna, Austria).

Repositories


GEO

GSE116266

BioProject

PRJNA477932

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Contact


Thomas Sandmann