Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 12
Release date: Sep 1 2018
Last update date: Sep 14 2018
Access: Public
Diseases: Hypoxia, Brain
Dataset link Expression data from Arabidopsis thaliana (Col-0) exposed to Arsenic, Hypoxia and their combination

Experimental Protocol


Roots of Arabidopsis thaliana (Col-0; WT), grown hydroponically for 32d were exposed to either 250 ┬ÁM As (AsV; Na2HAsO4) alone or in combination with hypoxic nutrient media and also hypoxia alone. The plant material was harvested after 7d of treatment and root samples were used for RNA extrcation and subsequent hybridization on Affymetrix microarray chips. Three completely independent biological replicates were analyzed for each treatment (C1, C2, C3: Control; As1, As2, As3: Arsenic; Hpx1, 3, 5: Hypoxia; Hpx2, 4, 6: Hypoxia + Arsenic)

Repositories


GEO

GSE119327

BioProject

PRJNA488788

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Contact


Vijay Kumar