Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 8
Release date: Jan 8 2014
Last update date: Feb 7 2014
Access: Public
Computational protocol: BWA, SAMtools, BEDTools
Dataset link Shugoshin biases chromosomes for biorientation through condensin recruitment to the pericentromere

Experimental Protocol


Two experiments: Experiment A: Sgo1 is required for condensin localization in the pericentromere. Sample 1: Wild type input DNA Sample 2: Wild type Brn1-6HA ChIP DNA, Sample 3 sgo1D input DNA, Sample 4 sgo1D Brn1-6HA ChIP DNA; Experiment B: Sgo1 is not required for cohesin localization in the periecentromere: Sample 5: wild type input DNA, Sample 6 Wild type Scc1-6HA ChIP DNA, Sample 7, sgo1D input DNA, Sample 8 sgo1D Scc1-6HA ChIP DNA. 1 replicate of each repeat

Repositories


GEO

GSE53856

ArrayExpress

E-GEOD-53856

ENA

SRP035211

BioProject

PRJNA233600

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Contact


Alastair Kerr
Alastair Robert Kerr

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