Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 16
Release date: Apr 13 2016
Last update date: Nov 28 2018
Access: Public
Taxon: Homo sapiens
Dataset link Next Generation Sequencing Compares Effects of microRNA-9 perturbation in control and SZ hiPSC NPCs

Experimental Protocol


Biological duplicates of passage-matched NPCs from 1 control (female) and 1 SZ patient (female) were transduced with either RV-GFP or RV-miR-9-GFP; GFP-positive NPCs were purified by fluorescent activated cell sorting (FACS) and expanded for two passages. In parallel, passage-matched NPCs from 2 controls (1 male, 1 female) and 2 SZ patients (1 male, 1 female) were transiently transfected with either scrambled or miR-9 LNA probes. In both instances, miR-9 perturbation was confirmed by qPCR.

Repositories


GEO

GSE80170

ArrayExpress

E-GEOD-80170

ENA

SRP073163

BioProject

PRJNA318168

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Contact


Kristen Brennand