C3POA specifications

Information


Unique identifier OMICS_30058
Name C3POA
Alternative name Contameric Consensus Caller using POA
Software type Package/Module, Pipeline/Workflow
Restrictions to use None
Input data Some raw nanopore reads.
Input format FASTQ
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Requirements
NumPy, poa, EMBOSS water: watHerON, minimap2, racon, blat executable
Maintained Yes

Download


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Versioning


No version available

Maintainer


  • person_outline Christopher Vollmers

Publication for Contameric Consensus Caller using POA

C3POA institution(s)
Department of Biomolecular Engineering, University of California Santa Cruz, CA, USA; Department of Molecular, Cellular, Developmental Biology, University of California Santa Cruz, CA, USA; UC Santa Cruz Genomics Institute, Santa Cruz, CA, USA; Department of Genetics, University of Georgia, Athens, GA, USA

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