Computational protocol: Mutagenesis of N-terminal residues of feline foamy virus Gag reveals entirely distinct functions during capsid formation, particle assembly, Gag processing and budding

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Protocol publication

[…] The structure of the interaction between foamy virus GAG and ENV was modelled using Modeller [] with the human structure [PDB 4jmr, 38] as a template. Contacts between side-chains were identified using RasMol []. […]

Pipeline specifications

Software tools MODELLER, RasMol
Applications Drug design, Protein structure analysis