Computational protocol: In vivo functional analysis of a nuclear restorer PPR protein

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Protocol publication

[…] Protein sequences were analyzed using the on-line resources of the Bioinformatics Toolkit© of the Department of Protein Evolution, Max Planck Institute of Developmental Biology, Tübingen, Germany; these included TPRpred (http://toolkit.tuebingen.mpg.de/tprpred) for the prediction of PPR domains and Quick2D (http://toolkit.tuebingen.mpg.de/quick2_d) for secondary structural prediction. […]

Pipeline specifications

Software tools TPRpred, Quick2D
Application Protein sequence analysis
Organisms Raphanus sativus