Computational protocol: A Non-Canonical Initiation Site Is Required for Efficient Translation of the Dendritically Localized Shank1 mRNA

Similar protocols

Protocol publication

[…] Analysis of potential translation initiation sites was performed using NetStart 1.0 (available at http://www.cbs.dtu.dk/services/NetStart/) and ATGpr (available at http://flj.hinv.jp/ATGpr/atgpr/index.html). To identify potential non-AUG start sites, all CUG and ACG codons in the Shank1 5′UTR were changed to AUG first, as these programs only recognize conventional start sites. […]

Pipeline specifications

Software tools NetStart, ATGpr
Application Transcription analysis
Organisms Homo sapiens