Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 12
Release date: Mar 28 2013
Last update date: Jul 26 2018
Access: Public
Computational protocol: BaseSpace, TopHat, SAMtools, IGV, edgeR, BioVenn, GEO
Dataset link Pbx and Prdm1a transcription factors differentially regulate subsets of the fast skeletal muscle program in zebrafish

Experimental Protocol


Total RNA samples were genotyped and pooled for 4 sample types: control-MO;prdm1+/+; control-MO;prdm1-/-; pbx2/4-MO;prdm1+/+; and pbx2/4-MO;prdm1-/- embryos at the 10 somite (s) stage from three independent sets of egg collections/injections.

Repositories


GEO

GSE45532

ArrayExpress

E-GEOD-45532

ENA

SRP020090

BioProject

PRJNA194542

Download


Contact


Stephen Tapscott
Zizhen yao

Dataset Statistics

info

Citations per year

Dataset publication