Dataset features

Specifications


Application: Hi-C analysis
Number of samples: 200
Release date: Dec 11 2014
Last update date: Oct 24 2018
Access: Public
Genes: CTCF
Taxon: Homo sapiens
Dataset link A three-dimensional map of the human genome at kilobase resolution reveals prinicples of chromatin looping

Experimental Protocol


in situ Hi-C and dilution Hi-C were used to probe the three-dimensional structure of the genome in eight diverse human cell types and one mouse cell type. Detailed information about all files (and file formats) uploaded to GEO for this study can be found in the supplementary file 'GSE63525_OVERALL_README.rtf'.

Repositories


GEO

GSE63525

ArrayExpress

E-GEOD-63525

ENA

SRP050102

BioProject

PRJNA268125

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Contact


Suhas Rao