Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 4
Release date: Jun 1 2012
Last update date: May 23 2013
Access: Public
Taxon: Arabidopsis thaliana, Fusarium oxysporum
Dataset link RNA-seq-based analysis of the pathogen-induced defense transcriptome in Arabidopsis

Experimental Protocol


Four samples (M1DPI, M6DPI, F1DPI and F6DPI; M=mock treated; F=Fusarium oxysporum infected; DPI=day post inoculation) were sequenced to identify pathogen responsive genes in each time point. Each sample was sequenced once, i.e. without biological replicate.

Repositories


GEO

GSE34241

ArrayExpress

E-GEOD-34241

ENA

SRP009647

BioProject

PRJNA149771

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Contact


Stuart Stephen