Dataset features

Specifications


Application: ChIP-on-chip analysis
Number of samples: 16
Release date: May 29 2009
Last update date: Jul 8 2015
Access: Public
Dataset link Genomewide analysis of Insulator protein binding sites in Drosophila embryos at E0-12

Experimental Protocol


ChIP-chip experiments were performed in Triplicate on Affymetrix arrays and compared to Input samples for the following datasets: E-0-12H: CTCF-C, CTCF-N, CP-190, BEAF-32, Su(Hw)-1, Su(Hw)-2, Mod(mdg4), GAF, H3K4me3, H3K27me3 and PolII. In addition ChIP experiments in S2 cells and Kc cells have been performed for H3K4me3 and CTCF. In addition, total RNA extracts have been performed in Embryos 0-12h and hybridized on Affymetrix Tiling arrays.

Repositories


GEO

GSE16245

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Contact


Kevin White

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