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|Interface||Web user interface|
|Restrictions to use||None|
|Output data||The web server output is a coarse-grained trajectory of generated conformations, its Jmol representation and predicted models in all-atom resolution (together with accompanying analysis).|
- person_outline Andrzej Kolinski
Publications for CABS-fold
Mitochondrial DNA Mutations Associated with Type 2 Diabetes Mellitus in Chinese Uyghur Population
[…] We used CABS-fold server to predict the 3D structure of MT-ATP8 protein, due to lack of available X-ray 3D structure of human MT-ATP8 molecule. Afterwards, we used SWISS-Pdbviewer (version 4.10) to analyze mu […]
Protein interaction evolution from promiscuity to specificity with reduced flexibility in an increasingly complex network
[…] insertion is apparently essential for dimerization as well. Interestingly, it was the most prominent feature that distinguishes SVP from its ancestor pSVP24. De novo modeling using servers Quark and CABS-fold predicted an α-helix structure for this insertion (). Since the main interaction interfaces in MADS-domain proteins are between α-helices, we can argue that the major gain of interactions ob […]
Computational methods in drug discovery
[…] Nuclear Overhauser Effect (NOE) data and chemical shifts have been used in combination with Rosetta ab initio structure prediction to obtain better protein structure predictions . Freely available CABS-FOLD uses a reduced representation approach and lets the user provide experimental distant restraints in ab initio structure prediction . This method was successful when tested in CASP6 for tar […]
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