CAGE Basic Viewer specifications

Information


Unique identifier OMICS_22511
Name CAGE Basic Viewer
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Not allowed
Maintained Yes

Taxon


  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus

Documentation


CAGE Basic Viewer citation

library_books

Alternative promoter usage of the membrane glycoprotein CD36

2006
BMC Mol Biol
PMCID: 1475603
PMID: 16515687
DOI: 10.1186/1471-2199-7-8

[…] is. Start positions of all EST sequences from GenBank for CD36 were mapped to the extracted sequences. Transcription start site information for the alternative first exons was also extracted from the CAGE basic viewer provided by FANTOM3 [,]. The degree of evolutionary conservation around the transcribed region was determined using human and mouse alignments available in the UCSC genome browser [] […]

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