Calypso specifications


Unique identifier OMICS_14424
Name Calypso
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A counts file providing taxonomic assignments of metagenomic (or 16S rDNA) sequences and a metadata file providing meta-information for each sample.
Input format Commom Biom-format
Output format PNG, PDF, SVG
Operating system Unix/Linux, Mac OS
Programming languages Java, Perl, R
License GNU General Public License version 2.0
Computer skills Advanced
Version 5.2
Stability Stable
Source code URL
Maintained Yes



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  • person_outline Lutz Krause <>

Publication for Calypso

Calypso institution(s)
QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia; The University of Queensland Diamantina Institute, Brisbane, QLD, Australia; Nestle Research Center, Vers-chez-les-Blanc, Lausanne, Switzerland
Calypso funding source(s)
This work is supported by a grant from the Australian Government and by an NHMRC Fellowship.

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