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CAMP specifications

Information


Unique identifier OMICS_05707
Name CAMP
Alternative names Collection of Anti-Microbial Peptides, CAMPr3
Restrictions to use None
Database management system MSSQL Server
Data access Browse
Version 3.0
Maintained Yes

Maintainer


  • person_outline Susan Idicula-Thomas

Publications for Collection of Anti-Microbial Peptides

CAMP citations

 (8)
library_books

Designing Antibacterial Peptides with Enhanced Killing Kinetics

2018
Front Microbiol
PMCID: 5829097
PMID: 29527201
DOI: 10.3389/fmicb.2018.00325

[…] the experimental observations. Recently, an attempt to evaluate the web-based antimicrobial prediction tools revealed that among the six general AMP prediction algorithms viz., ADAM (Porto et al., ), CAMPR3 RF & SVM (Waghu et al., ), MLAMP (Lin and Xu, ), DBAASP (Vishnepolesky and Pirtskhalava, ), and AMPA (Torrent et al., ); CAMPR3 RF demonstrated statistically significant improvement in performa […]

library_books

Novel Naja atra cardiotoxin 1 (CTX 1) derived antimicrobial peptides with broad spectrum activity

2018
PLoS One
PMCID: 5783354
PMID: 29364903
DOI: 10.1371/journal.pone.0190778

[…] ted upon SVM score to get the predicted most potent CPP, obtaining the final candidate sequence [].The final sequence KLIPIASKTCPAGKNLCYKM () has been therefore examined using the prediction tool of “CAMPR3” web server, to predict the antimicrobial activity of the submitted sequence by means of further four prediction models []:Support Vector Machine (SVM)Random Forests (RF)Artificial Neural Netwo […]

library_books

The rumen microbiome: an underexplored resource for novel antimicrobial discovery

2017
PMCID: 5711939
PMID: 29214045
DOI: 10.1038/s41522-017-0042-1

[…] was achieved using a variety of software available at various public databases. Specifically, we used the antimicrobial peptide database, the Antimicrobial Sequence Scanning System (AMPA), BACTIBASE, collection of anti-microbial peptides (CAMP),, and antibacterial peptides (AntiBP). Only ORFs that were predicted to encode putative AMPs within at least two of the utilized databases were explored fu […]

library_books

Myticalins: A Novel Multigenic Family of Linear, Cationic Antimicrobial Peptides from Marine Mussels (Mytilus spp.)

2017
Mar Drugs
PMCID: 5577615
PMID: 28829401
DOI: 10.3390/md15080261

[…] of isoelectric point with the ExPASy prediction servers (http://web.expasy.org/compute_pi/) and analyzed with a series of tools for the in silico prediction of antimicrobial activity. These included CAMPR3 (using the four available prediction algorithms, Random Forests, Discriminant Analysis, Support Vector Machines and Neural Artificial Network) [], the predictor of the DBAASP database [], AntiB […]

library_books

Comparative Analysis of the Bacterial Membrane Disruption Effect of Two Natural Plant Antimicrobial Peptides

2017
Front Microbiol
PMCID: 5253368
PMID: 28167938
DOI: 10.3389/fmicb.2017.00051

[…] peptide predictor tools were used; the Antimicrobial Peptide Database with APD3 algorithm: Antimicrobial Peptide Calculator and Predictor http://aps.unmc.edu/AP/ () and the AMP predictor tool of the Collection of Anti-Microbial Peptides (CAMP) (). The latter operates with four different prediction models taking into account the sequence composition, physico-chemical properties, and structural cha […]

library_books

Activity of Scorpion Venom Derived Antifungal Peptides against Planktonic Cells of Candida spp. and Cryptococcus neoformans and Candida albicans Biofilms

2016
Front Microbiol
PMCID: 5114273
PMID: 27917162
DOI: 10.3389/fmicb.2016.01844

[…] were considered to obtain the synthetic peptides as specified bellow (Table ).Comparative analyses of amino acids sequences were performed employing the Basic Local Alignment Search Tool (BLAST) and Collection of Anti-Microbial Peptides (CAMP) databases to identify peptides with at least 40% of identity to our queries sequence and to which antimicrobial activity was previously determined. The mul […]

Citations

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CAMP institution(s)
Biomedical Informatics Centre of Indian Council of Medical Research, National Institute for Research in Reproductive Health, Mumbai, India
CAMP funding source(s)
Supported by grants from Department of Science and Technology, Government of India [SB/S3/CE/028/2013] and Indian Council of Medical Research.

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