Protocols

Cancer GAMAdb specifications

Information


Unique identifier OMICS_12737
Name Cancer GAMAdb
Alternative name Genome-wide Association and Meta Analyses database
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained No

Maintainer


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Publication for Genome-wide Association and Meta Analyses database

Cancer GAMAdb citations

 (2)
library_books

Bioinformatics Resources for MicroRNA Discovery

2016
PMCID: 4718083
PMID: 26819547
DOI: 10.4137/BMI.S29513

[…] e association studies (GWAS) of cancer in National Human Genome Research Institute (NHGRI) GWAS catalog were collected. The data on meta-analysis of cancer candidate gene association studies from the Cancer GAMAdb were also collected. Developers also carried out functional annotation of genes containing somatic mutations that alter miRNA target sites with the KEGG. They further highlighted genes w […]

call_split

Integrative Analysis of Somatic Mutations Altering MicroRNA Targeting in Cancer Genomes

2012
PLoS One
PMCID: 3473044
PMID: 23091610
DOI: 10.1371/journal.pone.0047137
call_split See protocol

[…] omatic mutations that alter miRNA targeting with the results of association studies, we collected high ranking markers from association studies of cancer from dbGaP , the NHGRI GWAS Catalog , and the Cancer GAMAdb (http://www.hugenavigator.net/CancerGEMKB/caIntegratorStartPage.do). We first determined if the binding sites that were created or disrupted by these somatic mutations were also altered […]

Cancer GAMAdb institution(s)
Division of Cancer Control and Population Sciences, National Cancer Institute, Bethesda, MD, USA; Office of Public Health Genomics, Centers for Disease Control and Prevention, Atlanta, GA, USA; Office of Workforce Development, National Cancer Institute, Bethesda, MD, USA; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD, USA; Division of Cancer Control and Population Sciences, National Cancer Institute, Bethesda, MD, USA

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