Cancer-related Immunological Gene Database statistics

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Cancer-related Immunological Gene Database specifications

Information


Unique identifier OMICS_20948
Name Cancer-related Immunological Gene Database
Alternative name CIG-DB
Restrictions to use None
Database management system MySQL
Community driven No
Data access Browse
User data submission Not allowed
Maintained No

Taxon


  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus

Maintainer


This tool is not available anymore.

Publication for CIG-DB

Cancer-related Immunological Gene Database citations

 (2)
library_books

Characterization of the immunophenotypes and antigenomes of colorectal cancers reveals distinct tumor escape mechanisms and novel targets for immunotherapy

2015
Genome Biol
PMCID: 4377852
PMID: 25853550
DOI: 10.1186/s13059-015-0620-6

[…] the predicted neo-antigens (last update Dec 2014). Deposited peptidic epitopes, T-cell assays and MHC ligand assays were downloaded from the Immune Epitope Database [], Dana Farber repository [], and CIG-DB []. Automatized HTTP-mediated download and HTML processing retrieved all records from the following databases: MHCBN [], PeptideDatabase [], SYFPEITHI [], and TANTIGEN []. The entries were filt […]

library_books

Sequence analysis of T cell repertoires in health and disease

2013
Genome Med
PMCID: 3979016
PMID: 24172704
DOI: 10.1186/gm502

[…] d and hosted by ImMunoGeneTics is a useful tool for medium-scale TCR-seq data handling and annotation. The new tool for TCR-seq data processing called MiTCR [] is a recent and welcome addition, as is CIG-DB [], a new repository for TCR and immunoglobulin sequences observed in cancer studies. The field will benefit from further development of these types of community resource. In particular, a cent […]


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Cancer-related Immunological Gene Database institution(s)
Immunotherapy Division, Shizuoka Cancer Center Research Institute, Shizuoka, Japan; Department of Clinical Pharmacology, Tokai University School of Medicine, Kanagawa, Japan; Bioinformatics Institute for Global Good Inc., Tokyo, Japan; Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Shizuoka, Japan
Cancer-related Immunological Gene Database funding source(s)
Supported by a grant in Cooperation of Innovative Technology and Advanced Research in an Evolutional Area (CITY AREA) from the Ministry of Education, Culture, Sports, Science and Technology, Japan (MEXT).

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