CancerGenes statistics

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Protocols

CancerGenes specifications

Information


Unique identifier OMICS_21004
Name CancerGenes
Restrictions to use None
Database management system MySQL
Community driven No
Data access File download, Browse
User data submission Not allowed
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Maintainer


  • person_outline Alex Lash

Publication for CancerGenes

CancerGenes citations

 (3)
library_books

Pooled screening for anti proliferative inhibitors of protein protein interactions

2016
Nat Chem Biol
PMCID: 5756068
PMID: 26900867
DOI: 10.1038/nchembio.2026

[…] t are human proteins whose functional alterations are casually implicated in oncogenesis (e.g. oncogene product, tumor-suppressor gene products and proteins in core cancer pathway) are selected using CancerGenes database . […]

library_books

A systematic approach to identify novel cancer drug targets using machine learning, inhibitor design and high throughput screening

2014
Genome Med
PMCID: 4143549
PMID: 25165489
DOI: 10.1186/s13073-014-0057-7

[…] re causally implicated in oncogenesis (for example, oncogene products, tumor-suppressor gene products and proteins in core cancer pathways). We identified 1,367 cancer-related proteins, compiled from CancerGenes [] using the queries 'oncogene' and 'tumor suppressor' [] and two consensus studies [,]. To identify cancer disease gene products, we used the Online Mendelian Inheritance in Man (OMIM) da […]

call_split

Genome wide target profiling of piggyBac and Tol2 in HEK 293: pros and cons for gene discovery and gene therapy

2011
BMC Biotechnol
PMCID: 3078864
PMID: 21447194
DOI: 10.1186/1472-6750-11-28
call_split See protocol

[…] s were identified in build hg18 of the human genome using Blat [], with a sequence identity cutoff of 95%. Human genes were obtained from RefSeq [], and 2,075 cancer-related genes were taken from the CancerGenes database []. Upon counting the number of genes within n base intervals, all overlapping genes were first merged to avoid over-counting. CpG islands were taken from the UCSC Genome browser […]

Citations

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CancerGenes institution(s)
Computational Biology Center Memorial Sloan-Kettering Cancer Center, New York, NY, USA

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