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cancergrid-tma

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An open source web-based application for remote scoring of tissue microarray (TMA) images, which exploits the value of Microsoft Silverlight Deep Zoom to provide an intuitive interface for zooming and panning around digital images. We use and extend existing XML-based standards to ensure that the data collected can be archived and that our system is interoperable with other standards-compliant systems. cancergrid-tma has been used to automate a workflow for the high-throughput manual scoring of thousands of TMA images and make the results available for integration with clinical data.

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cancergrid-tma classification

cancergrid-tma specifications

Interface:
Web user interface
Programming languages:
Java
Computer skills:
Basic
Maintained:
Yes
Restrictions to use:
None
License:
BSD 2-clause “Simplified” License
Stability:
Stable

cancergrid-tma distribution

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Publications

Institution(s)

Department of Oncology, University of Cambridge and Cancer Research UK Cambridge Research Institute, Li Ka Shing Centre, Cambridge, UK

Funding source(s)

This work was funded by the MRC (Cancergrid Project) and by Cancer Research UK.

Link to literature

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