CancerSubtypes specifications

Information


Unique identifier OMICS_24078
Name CancerSubtypes
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.6.0
Stability Stable
Requirements
limma, BiocGenerics, grDevices, RUnit, knitr, cluster, survival, R(>=3.4), sigclust, impute, NMF, ConsensusClusterPlus, SNFtool, iCluster, RTCGA.mRNA, RTCGA.clinical
Maintained Yes

Download


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Versioning


No version available

Documentation


Maintainers


  • person_outline Taosheng Xu
  • person_outline Jiuyong Li
  • person_outline Thuc Le

Additional information


https://github.com/taoshengxu/CancerSubtypes

Publication for CancerSubtypes

CancerSubtypes institution(s)
Institute of Intelligent Machines, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China; School of Information Technology and Mathematical Sciences, University of South Australia, Adelaide, WA, Australia; Centre for Cancer Biology, University of South Australia, Adelaide, WA, Australia; Interuniversity Institute of Bioinformatics in Brussels (IB)2, Brussels, Belgium; Machine Learning Group (MLG), Department d’Informatique, Université libre de Bruxelles (ULB), Brussels, Belgium
CancerSubtypes funding source(s)
Supported by Australian Research Council Discovery Project DP140103617, by NHMRC grant ID 1123042, the National Natural Science Foundation of China ID 31371340, the BridgeIRIS project, INNOVIRIS, Region de Bruxelles Capitale, Brussels, Belgium, by GENomic profiling of Gastrointestinal Inflammatory-Sensitive CANcers (GENGISCAN), and by Belgian FNRS PDR (T100914F).

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