Canu specifications

Unique identifier:
OMICS_14592
Interface:
Command line interface
Input format:
FASTA/FASTQ
Operating system:
Unix/Linux
License:
GNU General Public License version 2.0
Version:
1.7
Source code URL:
https://codeload.github.com/marbl/canu/tar.gz/v1.5
Software type:
Pipeline/Workflow
Restrictions to use:
None
Biological technology:
Pacific Biosciences, Oxford Nanopore
Programming languages:
C, C++, Perl, Shell (Bash)
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

Subtools

  • TrioCanu

versioning

tutorial arrow
×
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.
Facilitate your tool traceability
Sign up for free to upload your code and get a DOI

No versioning.

Canu distribution

download

Canu support

Documentation

Maintainers

  • Adam Phillippy <>
  • Tim Phillippy <>

Additional information

http://canu.readthedocs.io/en/latest/quick-start.html

forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA; Institute of Medical Microbiology, Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany; Cell Wall Biology and Utilization Laboratory, ARS USDA, Madison, WI, USA; Pacific Biosciences, Menlo Park, CA, USA; Davies Research Centre, School of Animal and Veterinary Sciences, The University of Adelaide, Adelaide, SA, Australia; Robinson Research Institute, The University of Adelaide, Adelaide, SA, Australia; US Meat Animal Research Center, ARS USDA, Clay Center, NE, USA

Funding source(s)

Supported by the Intramural Research Program of the National Human Genome Research Institute, National Institutes of Health; the University of Adelaide; the USDA-ARS Project 3040-31000-100-00D; the USDAARS Project 5090-31000-026-00-D; a grant of the Korea Health Technology R&D Project through the Korea Health Industry Development Institute (KHIDI), funded by the Ministry of Health & Welfare, Republic of Korea (grant number: HI17C2098).

User review

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.

Related Tools