Protocols

Canvas specifications

Information


Unique identifier OMICS_10999
Name Canvas
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Its primary input is aligned reads.
Input format BAM
Output data Its primary output is a report giving the copy number status of the genome.
Output format VCF
Operating system Unix/Linux, Windows
Programming languages C#
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

Download


conda.png

Versioning


No version available

Documentation


Maintainer


  • person_outline Eric Roller

Publications for Canvas

Canvas citation

call_split

Assessment of the incorporation of CNV surveillance into gene panel next generation sequencing testing for inherited retinal diseases

2017
J Med Genet
PMCID: 5800348
PMID: 29074561
DOI: 10.1136/jmedgenet-2017-104791
call_split See protocol

[…] IRD. Six hundred and five samples were generated using Illumina sequencing chemistry as part of the┬áNational Institute for Health Research (NIHR) BioResource Rare Diseases project, and the Manta and Canvas software algorithms were used to detect CNVs. Seventy-seven┬ásamples were generated using Complete Genomics sequencing chemistry, with CNVs identified using the Complete Genomics V.2.5 variant c […]

Canvas institution(s)
Illumina Inc, San Diego, CA, USA; Illumina Cambridge Ltd, Essex, UK; Ashion Analytics, Phoenix, AZ, USA

Canvas reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Canvas