Canvas protocols

Canvas specifications

Information


Unique identifier OMICS_10999
Name Canvas
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Its primary input is aligned reads.
Input format BAM
Output data Its primary output is a report giving the copy number status of the genome.
Output format VCF
Operating system Unix/Linux, Windows
Programming languages C#
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Eric Roller <>

Publications for Canvas

Canvas IN pipeline

2017
PMCID: 5800348
PMID: 29074561
DOI: 10.1136/jmedgenet-2017-104791

[…] six hundred and five samples were generated using illumina sequencing chemistry as part of the┬ánational institute for health research (nihr) bioresource rare diseases project,18 and the manta and canvas software algorithms were used to detect cnvs.24 25 seventy-seven┬ásamples were generated using complete genomics sequencing chemistry,26 with cnvs identified using the complete genomics v.2.5 […]

Canvas institution(s)
Illumina Inc, San Diego, CA, USA; Illumina Cambridge Ltd, Essex, UK; Ashion Analytics, Phoenix, AZ, USA

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