CanvasXpress statistics

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Citations per year

Number of citations per year for the bioinformatics software tool CanvasXpress

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CanvasXpress specifications


Unique identifier OMICS_05571
Name CanvasXpress
Software type Framework/Library, Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Output format SVG
Operating system Unix/Linux
Programming languages Javascript, R, Other
License GNU General Public License version 3.0
Computer skills Advanced
Version 17.4
Stability Stable
Source code URL




No version available



This tool is not maintained anymore.

Publication for CanvasXpress

CanvasXpress citations


Identification of Putative Nuclear Receptors and Steroidogenic Enzymes in Murray Darling Rainbowfish (Melanotaenia fluviatilis) Using RNA Seq and De Novo Transcriptome Assembly

PLoS One
PMCID: 4658143
PMID: 26599404
DOI: 10.1371/journal.pone.0142636
call_split See protocol

[…] ggNOG [], and KEGG [] and subsets of these databases. Functional annotations, ORFs and transcripts were stored in a PostgreSQL database for access via a web browser-based viewer built with ExtJS4 and canvasXpress.Additional functional annotations were inferred by sequence similarity to other teleost sequences using BLAST searches [,], using controlled vocabularies obtained from the Gene Ontology d […]


Identification and characterization of three chemosensory receptor families in the cotton bollworm Helicoverpa armigera

BMC Genomics
PMCID: 4112213
PMID: 25027790
DOI: 10.1186/1471-2164-15-597

[…] t for isoforms and paralogues; 3) performed Trimmed Mean Normalization using edger and estimated Fragments Per Kilobase Per Million reads (FPKM) []; and 4) visualized the results using ggplot2 [] and canvasXpress ( From these data, certain cutoffs were used to make a true/false decision on whether a gene was expressed: a gene had to have at least four RNA-Seq reads aligne […]

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CanvasXpress institution(s)
Early Clinical Development, Pfizer Inc., Cambridge, MA, USA; Computational Genomics, Bristol-Myers Squibb Company, NJ, USA

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