CAP EST Assembler statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

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Associated diseases

Associated diseases

CAP EST Assembler specifications

Information


Unique identifier OMICS_17581
Name CAP EST Assembler
Interface Web user interface
Restrictions to use None
Input format FASTA
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Xiaoqiu Huang <>

CAP EST Assembler in publication

PMCID: 3499448
PMID: 23009612
DOI: 10.1186/1471-2148-12-190

[…] at the galaxy website [] using splicepredict trained on spotted pufferfish (tetraodon nigroviridis) sequences, comparison with ests using geneseqer [] once the ests were assembled using the cap est assembler (http://host9.bioinfo3.ifom-ieo-campus.it/cap/), comparisons with protein sequences using wise2 [], as well as a variety of gene prediction programs such as augustus []., […]


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