CarSPred specifications

Information


Unique identifier OMICS_06882
Name CarSPred
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Versioning


No version available

Publication for CarSPred

CarSPred citations

 (2)
library_books

MDD carb: a combinatorial model for the identification of protein carbonylation sites with substrate motifs

2017
BMC Syst Biol
PMCID: 5763492
PMID: 29322938
DOI: 10.1186/s12918-017-0511-4

[…] Considering the accessibility of previously published prediction tools, two online tools, CarSPred and predCar-Site, are available for the comparison of predictive performance based on independent testing datasets. FigureĀ  showed that the predCar-Site (green bars) can yield the highest spe […]

library_books

Investigation and identification of protein carbonylation sites based on position specific amino acid composition and physicochemical features

2017
BMC Bioinformatics
PMCID: 5374553
PMID: 28361707
DOI: 10.1186/s12859-017-1472-8

[…] eatures (PWM, AAC and AAindex) also achieves a remarkably higher sensitivity (0.755) in carbonylated P residues of the independent testing dataset. In comparison with an existing prediction tool, the CarSPred could provide the best sensitivity (0.811) in carbonylated T residues of the independent testing dataset. Overall, our method performs better than CarSPred based on the independent testing pe […]

CarSPred institution(s)
School of Electronic and Information Engineering, XI'an Jiaotong University, XI'an, China

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