CasOT specifications

Information


Unique identifier OMICS_04701
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Genome sequence files, a genome annotation file, an input file including individual 21–33-nt target sites.
Input format FASTA, GTF
Operating system Unix/Linux, Mac OS, Windows
Programming languages Perl
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes

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CasOT article

CasOT institution(s)
Key Laboratory of Cell Proliferation and Differentiation of the Ministry of Education, Center for Bioinformatics, College of Life Sciences, Peking University, Beijing, China; State Key Laboratory of Protein and Plant Gene Research, Center for Bioinformatics, College of Life Sciences, Peking University, Beijing, China; Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, CA, USA
CasOT funding source(s)
Supported by National Natural Science Foundation of China (NSFC) [31110103904], the 973 programs [2011CBA01000, 2012CB945101, 2011CBA01102], and NSFC [31171242].

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