casper specifications

Information


Unique identifier OMICS_01270
Name casper
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format BAM
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 2.14.0
Stability Stable
Requirements
limma, methods, BiocGenerics, Biobase, IRanges, GenomicRanges, Rsamtools, GenomeInfoDb, rtracklayer, S4Vectors(>=0.9.25), GenomicFeatures, gtools, sqldf, survival, mgcv, R(>=2.14.1), coda, EBarrays, gaga, VGAM
Maintained Yes

Versioning


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Documentation


Maintainer


  • person_outline David Rossell <>

Publication for casper

casper institution(s)
Institute for Research in Biomedicine (IRB Barcelona), Barcelona, Spain; Department of Statistical Science, Duke University, Durham, NC, USA; Department of Statistics, University of Warwick, Coventry, UK

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