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A package that calculates significant annotations (categories) in each of two (or more) feature (i.e. gene) lists, determines the overlap between the annotations, and returns graphical and tabular data about the significant annotations and which combinations of feature lists the annotations were found to be significant. categoryCompare facilitates interactive exploration through the use of RCytoscape (heavily suggested).

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categoryCompare classification

categoryCompare specifications

Unique identifier:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
GNU General Public License version 2.0
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categoryCompare distribution


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categoryCompare support


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