CMIF specifications

Unique identifier:
OMICS_18863
Restrictions to use:
None
Output data:
A table of functional triplets with their corresponding model classification.
Programming languages:
R
Stability:
Stable
Name:
Causal Model Inference Framework
Input data:
A matrix of TF activities per sample as measured by VIPER, continuous intensity profiles for the copy number calls and phenotype data that can be either image features or features derived from gene expression data.
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Maintained:
Yes

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CMIF distribution

download

CMIF support

Maintainer

  • Leon Chlon <>

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Publications

Institution(s)

Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK

Funding source(s)

Supported by the Cancer Research UK and Engineering and Physical Sciences Research Council Imaging Centre in Cambridge and Manchester grant (C197/A16465).

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