Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 10
Release date: Oct 1 2015
Last update date: Apr 19 2017
Access: Public
Chemicals: Ethanol, Calcium, Oxygen
Dataset link Transcript profiling upon ethanol-induced expression of Xcv type 3- effector xopB in A. thaliana

Experimental Protocol


For microarray analyses, five week old transgenic plants (# 10, 12, 27) and wild-type plants were watered with 10 ml 1% (v/v) ethanol per pot after light has switch on in the climate chamber. Leaves from individual plants were harvested 4 h after treatment and immediately frozen in liquid nitrogen. Development of phenotypic changes was monitored and leaves of plants showing comparable phenotypes were pooled into 3 replicates.

Repositories


GEO

GSE66477

BioProject

PRJNA277045

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Contact


Sophia Sonnewald