An automatically collected database of gene lists, which were reported mostly by experimental studies in various biological and clinical contexts. At the moment, the database covers 3369 gene lists extracted from 2644 papers published in approximately 80 peer-reviewed journals. As input, CCancer accepts a gene list. An enrichment analyses is implemented to generate, as output, a highly informative survey over recently published studies that report gene lists, which significantly intersect with the query gene list. A report on gene pairs from the input list which were frequently reported together by other biological studies is also provided.
Freiburg Center for Data Analysis and Modeling, University of Freiburg, Freiburg, Germany; Helmholtz Center Munich, German Research Center for Environmental Health (GmbH), Institute for Bioinformatics and Systems Biology, Neuherberg, Germany; Faculty of Medicine, University of Toronto, BBDMR, CCBR, Toronto, ON, Canada
CCancer funding source(s)
This work was supported by the Helmholtz Alliance on Systems Biology (project ‘CoReNe’).