CCAT specifications

Information


Unique identifier OMICS_02179
Name CCAT
Alternative name Combinatorial Code Analysis Tool
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

Taxon


  • Invertebrates
    • Drosophila melanogaster

Versioning


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Maintainers


  • person_outline Peng Jiang <>
  • person_outline Mona Singh <>

Information


Unique identifier OMICS_02179
Name CCAT
Alternative name Combinatorial Code Analysis Tool
Interface Web user interface
Restrictions to use None
Input data One or two gene names separated by space for their colocalization statistics measures.
Computer skills Basic
Stability Stable
Maintained Yes

Taxon


  • Invertebrates
    • Drosophila melanogaster

Maintainers


  • person_outline Peng Jiang <>
  • person_outline Mona Singh <>

Publication for Combinatorial Code Analysis Tool

CCAT institution(s)
Department of Computer Science, Princeton University, Princeton, NJ, USA; Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA
CCAT funding source(s)
Supported by the National Science Foundation [ABI-0850063], and the National Institutes of Health (NIH) [NIGMS R01 GM076275].

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