Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 28
Release date: Jun 23 2015
Last update date: Oct 18 2018
Access: Public
Taxon: Homo sapiens
Dataset link Cell cycle analysis of histone marks and 4C in human Fucci ESCs

Experimental Protocol


FACS-isolated cell cycle fractions (DN, early G1; KO2, late G1; AzL, S-phase; and AzH, G2/M) from Fucci hESCs were subject to ChIP-seq for H3K4me3, H3K27me3, H3K27ac and H3K4me1, and used for sequencing along with input controls for each of the 4 cell cycle fractions (20 samples total), using Illumina platform, or 4C-seq for each cell cycle fraction using viewpoints neighboring the GATA6 or SOX17 promoters.

Repositories


GEO

GSE61176

ArrayExpress

E-GEOD-61176

ENA

SRP046237

BioProject

PRJNA260404

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Contact


Stephen Dalton