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CCHMM_PROF specifications

Information


Unique identifier OMICS_07849
Name CCHMM_PROF
Interface Web user interface
Restrictions to use None
Input data Sequence
Input format Raw, FASTA
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Piero Fariselli <>

Publication for CCHMM_PROF

CCHMM_PROF citations

 (2)
library_books

Identification of a homogenous structural basis for oligomerization by retroviral Rev like proteins

2017
PMCID: 5568270
PMID: 28830558
DOI: 10.1186/s12977-017-0366-1

[…] in eiav rev, computational and biochemical studies indicated that a predicted coiled-coil motif in the central region of the protein is required for dimerization and rna binding []. the cchmm_prof coiled-coil server [], was used to assess whether coiled-coils were predicted for other retroviral rev-like proteins. predicted coiled-coil motifs were identified in the rev proteins […]

library_books

NUP 1 Is a Large Coiled Coil Nucleoskeletal Protein in Trypanosomes with Lamin Like Functions

2012
PMCID: 3313915
PMID: 22479148
DOI: 10.1371/journal.pbio.1001287

[…] nup-1 is a large protein (pi 5.07, mw>400 kda) associated with the nuclear periphery , that was identified as a major component of the t. brucei ne proteome . as predicted by both coils and cchmm_prof, nup-1 is almost exclusively coiled-coil with a central region of 17 near-perfect repeats of 144 amino acids () ,. no trans-membrane helices were predicted. moreover, the n- and c-terminal […]


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CCHMM_PROF institution(s)
Biocomputing Group, Department of Biology, University of Bologna, Bologna, Italy

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