CCP-EM statistics

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Associated diseases

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CCP-EM specifications

Information


Unique identifier OMICS_26613
Name CCP-EM
Alternative name Computational Project for Electron cryo-Microscopy
Software type Application/Script
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Computer skills Advanced
Stability Beta
Requirements
XQuartz
Maintained Yes

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Maintainer


  • person_outline CCP-EM Team <>

Publications for Computational Project for Electron cryo-Microscopy

CCP-EM in publications

 (10)
PMCID: 5962338
PMID: 29726815
DOI: 10.7554/eLife.35946.020

[…] motion and performs experimental dose-weighting) did not improve the quality of the density. local resolution was calculated with relion., model building and refinement was carried out using the ccp-em software suite (). the activated a2ar and mini-gs coordinates were taken as starting models (pdb code 5g53) together with the βγ coordinated from the β2ar complex structure (). jelly-body […]

PMCID: 5458487
PMID: 28580907
DOI: 10.1107/S2059798317008002

[…] introduction to the ccp-em proceedings special issue of acta cryst d., this special issue is the inaugural edition of proceedings of the ccp-em spring symposium. the symposium is an annual conference which aims […]

PMCID: 5458494
PMID: 28580914
DOI: 10.1107/S2059798317007021

[…] the prototype specific plasmodium proteasome inhibitors tested as potential antimalarials (li, o’donoghue et al., 2016; li, bogyo et al., 2016). within the context of the proceedings of the second ccp-em spring symposium, here we review our cryo-em analysis of ligand-bound human and p. falciparum proteasomes, focusing on a detailed description of the methods we used for structure […]

PMCID: 5524535
PMID: 28682240
DOI: 10.7554/eLife.25835.008

[…] emdb-sff (sff=segmentation file format), pdbe is developing translators to/from other commonly used formats. the code for these translators is provided as free open source and distributed via the ccp-em svn repository. comments on the schema should be sent to ap., as previously explained, structured biological annotation is the association of data with identifiers and ontologies taken […]

PMCID: 5139988
PMID: 27980506
DOI: 10.1107/S160057671601517X

[…] with other ccp groups, many of which have overlapping and intersecting interests. the best-known of these is ccp4 (crystallography) (winn et al., 2011). as well as ccp4, ccp-sas overlaps with ccp-em (electron cryo­micro­scopy) (wood et al., 2015), ccpn (macromolecular nmr spectroscopy), ccp5 (simulation of soft condensed phases) and ccpbiosim (biomolecular simulation) (lonsdale et al., […]


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CCP-EM institution(s)
Scientific Computing Department, Science and Technology Facilities Council, Research Complex, Harwell, UK
CCP-EM funding source(s)
Supported by Medical Research Council (award Nos. MR/J000825/1, MR/N009614/1).

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