CCTop specifications

Unique identifier:
OMICS_12279
Software type:
Application/Script
Restrictions to use:
None
Input format:
(Multi)fasta file
Output format:
.fasta, .bed and .xls
Programming languages:
Python
Stability:
Stable
Maintained:
Yes
Name:
CRISPR/Cas9 target online predictor
Interface:
Command line interface
Input data:
Sequence of nucleotides
Output data:
The sequence of the target sites, their coordinates and their detailed information
Operating system:
Unix/Linux
Computer skills:
Advanced
Requirements:
Bowtie 1, bx-Python

versioning

tutorial arrow
×
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.
Facilitate your tool traceability
Sign up for free to upload your code and get a DOI

No versioning.

CCTop distribution

download

CCTop specifications

Unique identifier:
OMICS_12279
Interface:
Web user interface
Input data:
Sequence of nucleotides
Programming languages:
Python
Stability:
Stable
Name:
CRISPR/Cas9 target online predictor
Restrictions to use:
None
Input format:
Either single query or batch search (FASTA)
Computer skills:
Basic
Maintained:
Yes

CCTop support

Documentation

Maintainer

  • Juan L. Mateo <>
  • Juan L. Mateo <>

forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

Centre for Organismal Studies, Heidelberg University, Heidelberg, Germany

Funding source(s)

Supported by the European Research Council and the German Research Foundation (DFG: SFB873)

User review

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.

User review

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.

Related Tools