CD-HIT-OTU specifications

Information


Unique identifier OMICS_01441
Name CD-HIT-OTU
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainers


  • person_outline Weizhong Li <>
  • person_outline Sitao Wu <>

Additional information


Two versions are available, to analyse 454 and Illumina reads. User Guide: http://weizhong-lab.ucsd.edu/cd-hit-otu/wiki/doku.php?id=cd-hit-otu_user_guide

Information


Unique identifier OMICS_01441
Name CD-HIT-OTU
Interface Web user interface
Restrictions to use None
Input data 454 rRNA FASTA file with primer included.
Input format FASTA
Computer skills Basic
Stability Stable
Maintained Yes

Maintainers


  • person_outline Weizhong Li <>
  • person_outline Sitao Wu <>

Additional information


Two versions are available, to analyse 454 and Illumina reads. User Guide: http://weizhong-lab.ucsd.edu/cd-hit-otu/wiki/doku.php?id=cd-hit-otu_user_guide

Publication for CD-HIT-OTU

CD-HIT-OTU institution(s)
Center for Research in Biological Systems, University of California San Diego, USA
CD-HIT-OTU funding source(s)
Supported by National Institutes of Health [R01RR025030 and R01HG005978] and the Gordon and Betty Moore Foundation [CAMERA project].

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