CEGA specifications


Unique identifier OMICS_10427
Alternative name Conserved Elements from Genomic Alignments
Restrictions to use None
Maintained No


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Publication for Conserved Elements from Genomic Alignments

CEGA citations


Integrating Genomic Data Sets for Knowledge Discovery: An Informed Approach to Management of Captive Endangered Species

Int J Genomics
PMCID: 4916311
PMID: 27376076
DOI: 10.1155/2016/2374610

[…] ion, homology versus compiled databases such as the NCBI NR database (http://www.ncbi.nlm.nih.gov/refseq/), the Uniprot database (http://www.uniprot.org/), Conserved Elements from Genomic Alignments (CEGA, http://cega.ezlab.org/) [], and motif-based methods such as those leveraged with InterProScan (http://www.ebi.ac.uk/Tools/pfa/iprscan5/).These genomic resources, including the (1) draft genome s […]


The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases

Nucleic Acids Res
PMCID: 4702916
PMID: 26615188
DOI: 10.1093/nar/gkv1310

[…] py-number profiles can also be queried. OrthoDB provides the base data for BUSCO methodology to assessments of genome assembly and annotation completeness (http://buscos.ezlab.org) (), as well as for CEGA (http://cega.ezlab.org) a catalog of conserved elements from genomic alignments. […]

CEGA institution(s)
Department of Genetic Medicine and Development, University of Geneva Medical School, Swiss Institute of Bioinformatics, Geneva, Switzerland
CEGA funding source(s)
Swiss National Science Foundation [PDFMP3_127347]; Swiss Institute of Bioinformatics (SIB) and Foundation Cavaglieri (in part)

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