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LM / LineageMapper

Serves for time-lapse images of biological cells, colonies, and particles. LM is a program useful for detecting 2D dynamic single cell behaviors: migration, mitosis, cell death, cells within sheets, and cells moving with high cell-cell contact. This tool includes three mains skills: (1) operates on segmented masks; (2) uses biological properties measured from the segmented images to detect mitosis; and (3) uses the overlap information between current and past frames to identify and separate cells mistakenly segmented.