CellCircuits specifications

Information


Unique identifier OMICS_02872
Name CellCircuits
Restrictions to use None
Community driven No
Data access Browse
User data submission Allowed
Maintained Yes

Maintainer


  • person_outline Trey Ideker

Additional information


http://www.cellcircuits.org/search/tutorial/Tutorial-home.html

Publication for CellCircuits

CellCircuits citation

library_books

Global alignment of protein–protein interaction networks by graph matching methods

2009
Bioinformatics
PMCID: 2687950
PMID: 19477997
DOI: 10.1093/bioinformatics/btp196

[…] onstrained GNA, namely, MRF and the constrained versions of IsoRank, GA and PATH. To construct the alignment made by the MRF method (Bandyopadhyay et al., ), we downloaded the result file (http://www.cellcircuits.org/Bandyopadhyay2006/data/Bandyopadhyay_results.xls) with probabilities for all possible protein association, and we extracted the one-to-one alignment by taking the most probable pairs. […]

CellCircuits institution(s)
Department of Bioengineering, University of California San Diego, La Jolla, CA, USA
CellCircuits funding source(s)
Supported by the National Science Foundation (NSF 0425926).

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