CellHarmony specifications

Information


Unique identifier OMICS_31752
Name CellHarmony
Software type Package/Module
Interface Command line interface
Restrictions to use None
Output data A final association z-score matrix derived from the Pearson correlation coefficients for all cells, an expression matrix in which each cell is placed adjacent to its best match, a query-only cell matrix with cells ordered and annotated according to the classification, and gene expression heatmaps of the expression matrices.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes

Download


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Versioning


No version available

Maintainers


  • person_outline Nathan Salomonis
  • person_outline Erica DePasquale

Additional information


https://github.com/nsalomonis/altanalyze/wiki/cellHarmony

Publication for CellHarmony

CellHarmony institution(s)
Division of Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, OH, USA; Department of Pediatrics, University of Cincinnati School of Medicine, Cincinnati, OH, USA; Division of Immunobiology and Center for Systems Immunology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Division of Experimental Hematology and Cancer Biology, Cincinnati Children’s Hospital Medical Center, Cincinnati, OH, USA; Department of Biomedical Informatics, University of Cincinnati, Cincinnati, OH, USA
CellHarmony funding source(s)
Supported by Cincinnati Children’s Hospital Research Foundation and funding from the National Institutes of Health R01 CA196658.

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