CellMaps specifications

Information


Unique identifier OMICS_12260
Interface Web user interface, Application programming interface
Restrictions to use None
Input data Networks can be imported from local files in SIF, XLSX or text formats and exported in SVG or SIF formats. Pre-defined networks can also be imported from Reactome, KEGG or IntAct using CellBase web services. Attribute files containing metadata information about nodes and edges (e.g. gene expression, GO terms, etc.) can also be imported as simple tab-delimited matrices.
Programming languages C, Java, Javascript
Computer skills Basic
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Joaquín Dopazo <>

CellMaps article

CellMaps institution(s)
Computational Genomics Department, Centro de Investigación Príncipe Felipe (CIPF), Valencia, Spain; Bioinformatics of Rare Diseases (BIER), CIBER de Enfermedades Raras (CIBERER), Valencia, Spain; Computational Genomics Chair, Bull-CIPF, Valencia, Spain; Department of Medicine, University of Cambridge, School of Clinical Medicine, Addenbrooke's Hospital, Hills Road, Cambridge, UK; HPC Service, UIS, University of Cambridge, Cambridge, UK; Functional Genomics Node, (INB, PRB2, ISCIII) at CIPF, Valencia, Spain
CellMaps funding source(s)
This work is supported by grants BIO2014-57291-R from the Spanish Ministry of Economy and Competitiveness (MINECO), and Plataforma de Recursos Biomoleculares y Bioinformáticos PT 13/0001/0030 from the ISCIII, both co-funded with European Regional Development Funds (ERDF), PROMETEOII/2014/025 from the Conselleria de Educacio of the Valencian Community, and the Fundació la Marató TV3 [20133134].

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