Protocols

Cellosaurus specifications

Information


Unique identifier OMICS_28280
Name Cellosaurus
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Not allowed
Content license CC Attribution-NonCommercial-NoDerivs
Maintained Yes
Wikipedia https://en.wikipedia.org/wiki/Cellosaurus

Taxon


  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus
    • Rattus norvegicus

Documentation


Additional information


https://web.expasy.org/cellosaurus/description.html https://github.com/calipho-sib/cellosaurus

Cellosaurus citations

 (2)
library_books

Comparison, alignment, and synchronization of cell line information between CLO and EFO

2017
BMC Bioinformatics
PMCID: 5763470
PMID: 29322915
DOI: 10.1186/s12859-017-1979-z

[…] Alignment by cross-referencing between CLO and EFO was mined from Cellosaurus knowledgebase. The source files of EFO and CLO were then processed for ontology class property alignment. A set of regular expression rules were designed for normalization of special chara […]

call_split

A large scale crop protection bioassay data set

2015
Sci Data
PMCID: 4493826
PMID: 26175909
DOI: 10.1038/sdata.2015.32
call_split See protocol

[…] vided by the assay description, and associated assay and target fields. Cell-lines used in assays were also mapped to the ChEMBL cell_dictionary and to several other external ontologies: CLO, EFO and Cellosaurus.Protein targets were mapped to corresponding primary accessions in the UniProt database. Where a protein from the correct species was not available in UniProt, a close orthologue was selec […]

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