Cellscape specifications

Information


Unique identifier OMICS_18697
Name Cellscape
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data The genomic content of each single cell and a single cell phylogeny.
Input format The genomic content of each single cell and a single cell phylogeny.
Output data An interactive display of the targeted phylogeny with a cell-by locus heatmap.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.4.0
Stability Stable
Requirements
R(>=3.3), rmarkdown, knitr, plyr(>=1.8.3), reshape2(>=1.4.1), stringr(>=1.0.0), gtools(>=3.5.0), htmlwidgets(>=0.5), jsonlite(>=0.9.19), dplyr(>=0.4.3)
Maintained Yes

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Versioning


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Documentation


Maintainer


  • person_outline Maia Smith <>

Additional information


https://github.com/Bioconductor-mirror/cellscape/tree/release-3.5

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