CellTracker specifications


Unique identifier OMICS_10715
Name CellTracker
Software type Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Input data MatLab, Image Processing Toolbox and for some optional functions Curve Fitting Toolbox
Output data The output statistics are stored in human readable table file (Excel, .csv). Furthermore, it is possible to create movies and visualize migration over time in 3D graphs (x, y, time).
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Dr. Filippo Piccinini <>

Publications for CellTracker

CellTracker institution(s)
Advanced Research Center on Electronic Systems for Information and Communication Technologies “E. De Castro” (ARCES), University of Bologna, Bologna, Italy; Department of Biochemistry and Cell Biology, Max F. Perutz Laboratories (MFPL), University of Vienna, Vienna Biocenter (VBC),Vienna, Austria; Synthetic and System Biology Unit, Hungarian Academia of Sciences, Biological Research Center (BRC), Szeged, Hungary; Institute for Molecular Medicine Finland, University of Helsinki, Helsinki, Finland
CellTracker funding source(s)
The Finnish TEKES FiDiPro; Hungarian National Brain Research Programme (MTASE-NAP B-BIOMAG); EMBO, Heidelberg, Germany (EMBO ASTF 233-2015)

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