CentiScaPe pipeline

CentiScaPe specifications

Information


Unique identifier OMICS_12245
Name CentiScaPe
Alternative name Centralities for Cytoscape
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Windows
License GNU General Public License version 3.0
Computer skills Medium
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Giovanni Scardoni <>

Publication for Centralities for Cytoscape

CentiScaPe IN pipelines

 (2)
2017
PMCID: 5432314
PMID: 28212580
DOI: 10.18632/oncotarget.15351

[…] correlation coefficients. the ingredients-targets networks were constructed for these herbs using cytoscape software [28] (version 3.2.1). the network was analyzed using cytoscape software with the centiscape plugin [29] to calculate topological parameters, including the degree, betweenness, closeness and centroid. the significant nodes representing putative major ingredients and major targets […]

2016
PMCID: 5008533
PMID: 27583849
DOI: 10.1097/MD.0000000000004389

[…] the networks. the ingredients-targets networks of herbs and herbs-targets networks were constructed using cytoscape software (version 3.2.1).[28] the networks were analyzed using cytoscape plugin centiscape to calculate topological parameters, including degree, betweenness, and closeness. the larger the node's degree/betweenness/closeness is, the more important the node is in the network.[28] […]

CentiScaPe institution(s)
Center for Biomedical Computing, University of Verona, Strada le Grazie, Verona; Department of Pathology, University of Verona, Strada le Grazie, Verona, Italy
CentiScaPe funding source(s)
Fondazione Cariverona; Fondazione Cariverona; Associazione Italiana per la Ricerca sul Cancro

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